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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs12576563 chr11:121487346 A/G NFRKB chr11:129733531-129765485:- 0.7 6.67 9.14E-11 Box Plot
BLCA rs12576563 chr11:121487346 A/G RNF214 chr11:117103341-117157161:+ 0.73 5.97 5.44E-9 Box Plot
BLCA rs12576563 chr11:121487346 A/G RNF26 chr11:119205237-119208023:+ 0.72 7.08 6.8E-12 Box Plot
BLCA rs12576563 chr11:121487346 A/G RPUSD4 chr11:126071989-126081587:- 0.76 6.9 2.15E-11 Box Plot
BLCA rs12576563 chr11:121487346 A/G SLC37A4 chr11:118894824-118901616:- 0.61 6.28 9.46E-10 Box Plot
BLCA rs12576563 chr11:121487346 A/G SRPR chr11:126132882-126138949:- 0.9 7.42 7.42E-13 Box Plot
BLCA rs12576563 chr11:121487346 A/G TIMM8B chr11:111955524-111957522:- 0.62 6.6 1.34E-10 Box Plot
BLCA rs12576563 chr11:121487346 A/G UBE4A chr11:118230300-118269926:+ 0.79 7.45 6.44E-13 Box Plot
BLCA rs12576563 chr11:121487346 A/G VPS11 chr11:118938403-118952688:+ 0.77 6.65 1.01E-10 Box Plot
BLCA rs12576563 chr11:121487346 A/G ZNF202 chr11:123594885-123612383:- 0.67 6.91 2.03E-11 Box Plot
BLCA rs12576563 chr11:121487346 A/G ZW10 chr11:113603909-113644533:- 0.6 6.44 3.55E-10 Box Plot
BLCA rs12576749 chr11:75676260 C/T RELT chr11:73087309-73108519:+ -0.47 -6.05 3.5E-9 Box Plot
BLCA rs12587713 chr14:39735104 G/C LOC647288 chr13:75811890-75814517:- -0.39 -6.28 8.95E-10 Box Plot
BLCA rs12588386 chr14:39766170 G/A LOC647288 chr13:75811890-75814517:- -0.38 -6.12 2.34E-9 Box Plot
BLCA rs12588483 chr14:39912380 C/T LOC647288 chr13:75811890-75814517:- -0.37 -5.96 5.75E-9 Box Plot